STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_01742Unannotated protein. (253 aa)    
Predicted Functional Partners:
GCA_000406005_03581
Unannotated protein.
 
 0.872
GCA_000406005_01602
Unannotated protein.
 
 
 0.749
GCA_000406005_02682
Unannotated protein.
  
 0.747
GCA_000406005_03509
Unannotated protein.
  
 
 0.726
GCA_000406005_01743
Unannotated protein.
       0.709
GCA_000406005_00458
Unannotated protein.
   
 0.642
GCA_000406005_04670
Unannotated protein.
   
 
  0.616
GCA_000406005_01744
Unannotated protein.
       0.603
GCA_000406005_03181
Unannotated protein.
  
 
 0.592
GCA_000406005_00492
Unannotated protein.
      0.587
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.