STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_02622Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_000406005_00035
Unannotated protein.
 
     0.775
GCA_000406005_04566
Unannotated protein.
  
     0.774
GCA_000406005_03376
Unannotated protein.
  
     0.772
GCA_000406005_01141
Unannotated protein.
    
 0.564
GCA_000406005_02812
Unannotated protein.
    
 0.564
GCA_000406005_03157
Unannotated protein.
   
 
 0.560
GCA_000406005_01841
Unannotated protein.
   
 
  0.555
GCA_000406005_02102
Unannotated protein.
    
  0.541
GCA_000406005_03108
Unannotated protein.
 
 
0.485
GCA_000406005_04107
Unannotated protein.
  
     0.465
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.