STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402835_00918Unannotated protein. (380 aa)    
Predicted Functional Partners:
GCA_000402835_00566
Unannotated protein.
   
 0.998
GCA_000402835_00676
Unannotated protein.
  
 0.998
GCA_000402835_00184
Unannotated protein.
   
 0.997
GCA_000402835_00245
Unannotated protein.
   
  0.995
GCA_000402835_00555
Unannotated protein.
    
 0.995
GCA_000402835_00562
Unannotated protein.
   
 0.992
GCA_000402835_00576
Unannotated protein.
    
 0.983
GCA_000402835_00558
Unannotated protein.
   
  0.982
GCA_000402835_00573
Unannotated protein.
  
 
 0.981
GCA_000402835_00906
Unannotated protein.
  
 
 0.978
Your Current Organism:
Synergistetes bacterium JGI 0000079D21
NCBI taxonomy Id: 1104568
Other names: S. bacterium JGI 0000079-D21, Synergistetes bacterium JGI 0000079-D21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.