STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000404425_00975Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_000404425_00976
Unannotated protein.
     
 0.826
GCA_000404425_01003
Unannotated protein.
     
 0.730
GCA_000404425_00065
Unannotated protein.
   
 
 0.701
GCA_000404425_00028
Unannotated protein.
     
 0.661
GCA_000404425_00392
Unannotated protein.
    
 
 0.628
GCA_000404425_00311
Unannotated protein.
    
 
 0.617
GCA_000404425_01065
Unannotated protein.
   
  
 0.579
GCA_000404425_00462
Unannotated protein.
   
 
 0.577
GCA_000404425_00833
Unannotated protein.
  
 
 0.543
GCA_000404425_00287
Unannotated protein.
     
 0.533
Your Current Organism:
Armatimonadetes bacterium JGI 0000077K19
NCBI taxonomy Id: 1104605
Other names: A. bacterium JGI 0000077-K19, Armatimonadetes bacterium JGI 0000077-K19
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.