STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJF42670.1Trk system potassium uptake protein TrkA, N-terminal domain protein. (222 aa)    
Predicted Functional Partners:
EJF42131.1
Cation transport protein.
  
 
 0.858
EJF42632.1
Trk system potassium uptake protein TrkA, N-terminal domain protein.
 
    
0.837
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
    
 0.791
EJF42667.1
Hypothetical protein.
 
     0.785
EJF42682.1
E1-E2 ATPase.
  
  
 0.776
EJF42679.1
Hypothetical protein; Identified by glimmer; putative.
       0.746
nadE
Putative NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.719
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.652
EJF42648.1
Hypothetical protein; Identified by glimmer; putative.
       0.598
EJF42671.1
PF11234 family protein.
       0.581
Your Current Organism:
Clostridium sp. MSTE9
NCBI taxonomy Id: 1105031
Other names: C. sp. MSTE9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.