Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EJF38253.1 | EJF38579.1 | HMPREF1141_3347 | HMPREF1141_2054 | DNA-binding helix-turn-helix protein. | Glyoxalase-like domain protein. | 0.749 |
EJF38253.1 | EJF38595.1 | HMPREF1141_3347 | HMPREF1141_2048 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.746 |
EJF38253.1 | EJF39089.1 | HMPREF1141_3347 | HMPREF1141_0617 | DNA-binding helix-turn-helix protein. | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | 0.756 |
EJF38253.1 | EJF39341.1 | HMPREF1141_3347 | HMPREF1141_0384 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.746 |
EJF38253.1 | EJF41014.1 | HMPREF1141_3347 | HMPREF1141_3319 | DNA-binding helix-turn-helix protein. | 3-beta hydroxysteroid dehydrogenase/isomerase family protein. | 0.749 |
EJF38253.1 | EJF41338.1 | HMPREF1141_3347 | HMPREF1141_0471 | DNA-binding helix-turn-helix protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.959 |
EJF38253.1 | EJF42197.1 | HMPREF1141_3347 | HMPREF1141_0719 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.746 |
EJF38253.1 | EJF42751.1 | HMPREF1141_3347 | HMPREF1141_1770 | DNA-binding helix-turn-helix protein. | Nucleotide sugar dehydrogenase. | 0.809 |
EJF38253.1 | cinA | HMPREF1141_3347 | HMPREF1141_0465 | DNA-binding helix-turn-helix protein. | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 0.766 |
EJF38253.1 | nadE | HMPREF1141_3347 | HMPREF1141_1729 | DNA-binding helix-turn-helix protein. | Putative NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.699 |
EJF38579.1 | EJF38253.1 | HMPREF1141_2054 | HMPREF1141_3347 | Glyoxalase-like domain protein. | DNA-binding helix-turn-helix protein. | 0.749 |
EJF38579.1 | EJF41338.1 | HMPREF1141_2054 | HMPREF1141_0471 | Glyoxalase-like domain protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.778 |
EJF38579.1 | EJF42751.1 | HMPREF1141_2054 | HMPREF1141_1770 | Glyoxalase-like domain protein. | Nucleotide sugar dehydrogenase. | 0.784 |
EJF38595.1 | EJF38253.1 | HMPREF1141_2048 | HMPREF1141_3347 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.746 |
EJF38595.1 | EJF39341.1 | HMPREF1141_2048 | HMPREF1141_0384 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.494 |
EJF38595.1 | EJF42197.1 | HMPREF1141_2048 | HMPREF1141_0719 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.505 |
EJF39089.1 | EJF38253.1 | HMPREF1141_0617 | HMPREF1141_3347 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | DNA-binding helix-turn-helix protein. | 0.756 |
EJF39089.1 | nadE | HMPREF1141_0617 | HMPREF1141_1729 | Sugar-phosphate isomerase, RpiB/LacA/LacB family. | Putative NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.473 |
EJF39341.1 | EJF38253.1 | HMPREF1141_0384 | HMPREF1141_3347 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.746 |
EJF39341.1 | EJF38595.1 | HMPREF1141_0384 | HMPREF1141_2048 | DNA-binding helix-turn-helix protein. | DNA-binding helix-turn-helix protein. | 0.494 |
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