Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KMV24199.1DitF protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
KMV24200.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.976
KMV17515.1
hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.964
KMV23924.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
KMV24160.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.868
KMV24304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.866
KMV23218.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
KMV16693.1
Nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.863
KMV24299.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.862
KMV19101.1
Nucleic-acid-binding protein containing a Zn-ribbon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.843
KMV23044.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.840
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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