STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV23902.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
KMV23900.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.863
KMV23901.1
rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.863
KMV23903.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
KMV23855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.585
KMV24050.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
KMV21889.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.572
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
    
  0.559
KMV21594.1
Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
   
 0.514
KMV22150.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.509
KMV18234.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.498
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.