Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
KMV23956.1MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
KMV23957.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
KMV23953.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
KMV23955.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
KMV23952.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
KMV23958.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
KMV23954.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
KMV24486.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
KMV23461.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
KMV24145.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
KMV22920.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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