Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMV23454.1Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
KMV23455.1
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
KMV23878.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
KMV23580.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.710
KMV17881.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
KMV24268.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
KMV23581.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
KMV23453.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
KMV24218.1
F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
KMV24014.1
FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.513
KMV23243.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.504
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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