STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-3Ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (137 aa)    
Predicted Functional Partners:
KMV23550.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.990
KMV21211.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.961
KMV21786.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.834
KMV22687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.809
vapC-4
Ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.692
KMV23381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.596
KMV21799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.560
KMV23552.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
KMV23024.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
KMV23553.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.