STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV22883.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)    
Predicted Functional Partners:
KMV22884.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
KMV22885.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.966
KMV22887.1
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KMV20119.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.781
KMV20881.1
Bile acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
KMV14803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.752
KMV24436.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.751
KMV22844.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
bphC
Extradiol dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
KMV17372.1
Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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