STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV22628.1Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
KMV22687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.919
KMV23550.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.735
KMV21211.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.735
KMV23381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.703
KMV21786.1
Antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.646
KMV21200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
KMV22627.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.439
KMV13464.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
KMV13535.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
KMV13510.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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