Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
KMV22688.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
KMV22637.1
Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.867
KMV22638.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.679
KMV22689.1
5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
KMV22639.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
KMV22636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
KMV22645.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.511
KMV22634.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
KMV22635.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
KMV22119.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
KMV22690.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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