Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMV22543.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
KMV22542.1
Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.997
KMV24584.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
pyrF
Orotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.729
KMV21014.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.729
KMV22544.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
KMV22545.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
KMV18066.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.690
KMV18065.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
KMV24053.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.669
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
    
   0.641
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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