STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV22407.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
KMV22406.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
KMV22403.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
KMV22405.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KMV22404.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
KMV22408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.617
KMV22446.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.592
KMV22795.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.590
htpX
Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.
   
  
 0.590
KMV23826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.519
KMV22083.1
Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.480
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.