Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
KMV21620.1Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)    
Predicted Functional Partners:
KMV21618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
rtcB
RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family.
       0.665
KMV21621.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
KMV22134.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
KMV23791.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
KMV24004.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
KMV24342.1
Adenylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
KMV24003.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
KMV15522.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.433
KMV21455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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