Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMV21517.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (136 aa)    
Predicted Functional Partners:
KMV21518.1
Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
       0.664
KMV21516.1
Type VII secretion protein EsxI; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
       0.628
KMV21519.1
PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
KMV21520.1
PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
KMV21514.1
Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
KMV21515.1
Magnesium transporter MgtE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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