Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
eccA-3Secretion protein EccA; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)    
Predicted Functional Partners:
KMV21408.1
Secretion protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.905
KMV21378.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.881
eccE-2
Secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.855
KMV20848.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.830
KMV21407.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
KMV13610.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.794
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.777
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
 0.737
KMV22195.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.716
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.707
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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