Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMV21307.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)    
Predicted Functional Partners:
KMV21300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.994
KMV21301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.983
KMV24412.1
Carboxylate--amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
      0.887
KMV21820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.820
KMV21821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.689
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
  0.611
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
  0.611
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.605
KMV22261.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.521
KMV21819.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.476
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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