STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMV20848.1Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
KMV22195.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.916
KMV23192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.911
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
    
 0.873
KMV22819.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.870
KMV22741.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.870
cobB
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
    
 0.840
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
    
 0.840
KMV24414.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
 0.830
eccA
Secretion protein EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.830
KMV22072.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.830
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.