STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV20798.1Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)    
Predicted Functional Partners:
KMV23192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.952
KMV18057.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.945
KMV22328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.874
KMV20800.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
 
 0.872
mftG
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.847
KMV20797.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.816
KMV24436.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
KMV22885.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
KMV20119.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
KMV16936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.810
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.