STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV19091.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)    
Predicted Functional Partners:
KMV19092.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.937
KMV13496.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.901
KMV21783.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.757
KMV16229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
KMV15621.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.599
KMV23001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
KMV13550.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
KMV24111.1
Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
KMV13567.1
PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
KMV13680.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.