STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV18400.1Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
KMV18399.1
F420-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
KMV24316.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.605
KMV23114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.596
KMV22843.1
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.595
KMV18414.1
Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.595
KMV22904.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.588
KMV18401.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
KMV22626.1
Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
KMV22864.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.560
KMV22950.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.