STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMV16827.1Secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
eccD-3
Secretion protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
KMV23568.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.997
eccB
Secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.996
eccD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
KMV16824.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.963
eccB-3
Secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.961
mycP-2
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.958
KMV23787.1
Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.880
KMV22061.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.880
KMV21374.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.880
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.