Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
KMV14311.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)    
Predicted Functional Partners:
KMV15015.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.779
KMV13655.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.776
KMV13550.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KMV14310.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KMV13567.1
PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
KMV13680.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
KMV13468.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
KMV22615.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
KMV15621.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
KMV22848.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
Your Current Organism:
Mycobacterium heckeshornense
NCBI taxonomy Id: 110505
Other names: CCUG 51897, CIP 107347, DSM 44428, JCM 15655, M. heckeshornense, Mycobacterium heckeshornense Roth et al. 2001, strain S369
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