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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_00535COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component. (258 aa)    
Predicted Functional Partners:
MCE_00530
O-antigen export system ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.993
MCE_03130
Hypothetical protein.
  
  
 0.929
MCE_03150
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.914
MCE_00540
Putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
 0.833
MCE_00525
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
       0.780
MCE_04025
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.632
nrdF
Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
    0.518
MCE_08035
Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
 
  
 0.490
MCE_01495
COG0765 ABC-type amino acid transport system, permease component.
    
  0.440
MCE_03295
COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
  
 0.438
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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