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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_01990COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (148 aa)    
Predicted Functional Partners:
MCE_01995
COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    0.902
MCE_02005
Ferredoxin, 2Fe-2s; COG0633 Ferredoxin.
  
    0.794
MCE_02000
Hypothetical protein.
       0.792
MCE_04095
Putative sigma(54) modulation protein; COG1544 Ribosome-associated protein Y (PSrp-1).
  
  
 0.700
hscB
Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
     
 0.693
MCE_03415
COG0281 Malic enzyme.
  
  
 0.680
groEL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.646
MCE_04810
COG0350 Methylated DNA-protein cysteine methyltransferase.
  
    0.643
hscA
Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
     
 0.626
MCE_01600
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
 0.610
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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