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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_02135Antitoxin of toxin-antitoxin (TA) system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
MCE_02140
Putative toxin of toxin-antitoxin (TA) system StbD; COG4115 Uncharacterized protein conserved in bacteria.
 
 
 0.989
MCE_01265
Putative toxin of toxin-antitoxin (TA) system; COG4115 Uncharacterized protein conserved in bacteria.
  
 
 0.788
MCE_02145
Beta 1,4 glucosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.759
MCE_02150
Protease; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
       0.550
MCE_05305
Hypothetical protein.
   
 
 0.497
MCE_02125
COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
       0.443
MCE_02130
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
       0.443
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.