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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_02200COG3827 Uncharacterized protein conserved in bacteria. (132 aa)    
Predicted Functional Partners:
MCE_02195
COG1538 Outer membrane protein.
 
     0.858
MCE_01085
Stage 0 sporulation protein J; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
    
 
 0.818
MCE_08050
COG3637 Opacity protein and related surface antigens.
  
     0.695
MCE_08045
COG3637 Opacity protein and related surface antigens.
  
     0.586
MCE_02930
tonB/tolA protein.
  
     0.573
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
     0.549
MCE_07375
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.544
MCE_02205
Ankyrin; COG0666 FOG: Ankyrin repeat.
 
     0.541
MCE_02185
Hypothetical protein.
       0.489
MCE_02190
Hypothetical protein.
       0.489
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.