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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_02930tonB/tolA protein. (320 aa)    
Predicted Functional Partners:
MCE_02925
COG0848 Biopolymer transport protein.
  
 
 0.996
MCE_02920
COG0811 Biopolymer transport proteins.
  
 
 0.992
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.869
MCE_08050
COG3637 Opacity protein and related surface antigens.
  
 
   0.787
MCE_08045
COG3637 Opacity protein and related surface antigens.
  
 
   0.776
MCE_03295
COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.701
MCE_00800
COG0711 F0F1-type ATP synthase, subunit b.
 
     0.690
MCE_01380
Hypothetical protein.
 
   
 0.674
MCE_03215
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.673
MCE_03080
DNA processing protein DprA.
 
     0.669
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.