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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_03830COG2919 Septum formation initiator. (101 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein ftsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 
 0.991
MCE_03840
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.806
MCE_03835
Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
       0.804
MCE_03080
DNA processing protein DprA.
 
     0.753
MCE_00345
COG2927 DNA polymerase III, chi subunit.
  
     0.748
MCE_02930
tonB/tolA protein.
 
     0.667
MCE_03845
Osmolarity sensor protein EnvZ; COG0642 Signal transduction histidine kinase.
 
     0.661
MCE_00395
Hypothetical protein.
 
     0.656
MCE_01445
COG3660 Predicted nucleoside-diphosphate-sugar epimerase.
  
     0.642
MCE_02455
COG2825 Outer membrane protein.
 
     0.614
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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