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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_04340Biotin--protein ligase; COG0340 Biotin-(acetyl-CoA carboxylase) ligase. (261 aa)    
Predicted Functional Partners:
MCE_06300
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
  
 0.972
MCE_06305
propionyl-CoA carboxylase beta chain precursor; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 
 0.957
MCE_03975
Hypothetical protein; COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily.
      0.722
MCE_04320
BioY family protein.
 
   
 0.715
MCE_05090
Putative glycoprotein endopeptidase; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
 
    0.684
MCE_07175
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
   
 0.660
MCE_03415
COG0281 Malic enzyme.
     
 0.648
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.599
MCE_07510
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
 0.596
MCE_07730
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
  
 0.588
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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