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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_04565Hypothetical protein; COG0591 Na+/proline symporter. (1166 aa)    
Predicted Functional Partners:
MCE_04015
Succinate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.840
MCE_01600
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
 0.825
MCE_06355
COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
 
     0.781
MCE_04605
COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
 
     0.768
MCE_07015
COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
  
     0.766
MCE_05835
COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
 
    0.738
MCE_04625
COG0642 Signal transduction histidine kinase.
  
  
 0.663
MCE_05825
COG0642 Signal transduction histidine kinase.
  
  
 0.663
sdhA
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
  
 0.657
gltA
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.623
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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