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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_04905Hypothetical protein; COG1357 Uncharacterized low-complexity proteins. (586 aa)    
Predicted Functional Partners:
MCE_04910
Nitrogen assimilation regulatory protein NtrX; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
  
    0.800
MCE_01150
Hypothetical protein; COG3704 Type IV secretory pathway, VirB6 components.
  
     0.743
MCE_00840
Cell surface antigen.
 
    0.730
MCE_01380
Hypothetical protein.
 
    0.635
MCE_07995
COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain.
 
    0.577
MCE_01160
VirB6; COG3704 Type IV secretory pathway, VirB6 components.
  
     0.503
MCE_06010
Conjugal transfer protein TraA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
     0.500
MCE_04920
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
     0.499
MCE_05865
Conjugal transfer protein TraA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
     0.499
MCE_01155
Channel protein; COG3704 Type IV secretory pathway, VirB6 components.
  
     0.497
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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