close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_05460Hypothetical protein. (263 aa)    
Predicted Functional Partners:
MCE_05465
COG0349 Ribonuclease D.
   
   0.804
MCE_05890
F pilus assembly protein TraH.
  
     0.557
MCE_05455
COG0354 Predicted aminomethyltransferase related to GcvT.
       0.549
MCE_05710
F pilus assembly protein TraF.
 
     0.543
MCE_05670
Conjugative transfer protein TraW.
  
     0.511
MCE_05695
Conjugative transfer protein TrbC; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.474
MCE_05130
COG0814 Amino acid permeases.
  
     0.463
MCE_05995
Putative conjugative transfer protein TraD; COG3505 Type IV secretory pathway, VirD4 components.
  
     0.459
MCE_05900
Conjugative transfer protein TraN.
  
     0.447
MCE_05875
Conjugative transfer protein TraD; COG3505 Type IV secretory pathway, VirD4 components.
  
     0.444
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.