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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_05515Hypothetical protein; COG3677 Transposase and inactivated derivatives. (101 aa)    
Predicted Functional Partners:
MCE_05510
Transposase-like protein.
 
     0.888
MCE_04625
COG0642 Signal transduction histidine kinase.
   
 
 0.791
MCE_05825
COG0642 Signal transduction histidine kinase.
   
 
 0.791
MCE_04910
Nitrogen assimilation regulatory protein NtrX; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
   
 
 0.709
MCE_05525
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
       0.562
MCE_05520
Hypothetical protein.
       0.561
MCE_05420
Sensor protein; COG0642 Signal transduction histidine kinase.
   
 
 0.550
MCE_04790
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
     0.490
MCE_00960
Putative transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   
 
 0.468
MCE_01365
Transcriptional activator protein CzcR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   
 
 0.468
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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