Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCE_05995Putative conjugative transfer protein TraD; COG3505 Type IV secretory pathway, VirD4 components. (276 aa)    
Predicted Functional Partners:
MCE_05670
Conjugative transfer protein TraW.
 
     0.776
MCE_05890
F pilus assembly protein TraH.
 
   
 0.775
MCE_05695
Conjugative transfer protein TrbC; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.774
MCE_05710
F pilus assembly protein TraF.
 
     0.765
MCE_05900
Conjugative transfer protein TraN.
 
     0.757
MCE_06010
Conjugal transfer protein TraA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
   
 0.756
MCE_05865
Conjugal transfer protein TraA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
   
 0.754
MCE_05895
F pilus assembly protein TraF.
 
     0.750
MCE_06015
Conjugal transfer protein TraA; COG0358 DNA primase (bacterial type).
 
   
 0.702
MCE_05885
Conjugative transfer protein TraG.
 
     0.690
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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