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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_06060COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (232 aa)    
Predicted Functional Partners:
MCE_06065
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 0.999
MCE_04950
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.976
MCE_07270
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.964
MCE_06300
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
 0.760
MCE_03625
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
  
 0.533
MCE_02440
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
  
 0.501
MCE_06305
propionyl-CoA carboxylase beta chain precursor; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
  
 0.497
MCE_04015
Succinate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
  
 0.447
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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