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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_07220Hypothetical protein; COG0666 FOG: Ankyrin repeat. (103 aa)    
Predicted Functional Partners:
MCE_06315
Acylglycerophosphoethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
  
 
 0.678
MCE_05950
COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
  
 0.627
MCE_02205
Ankyrin; COG0666 FOG: Ankyrin repeat.
  
 
 0.622
MCE_02570
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.611
MCE_08000
Cell division protein FtsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
 
 0.603
MCE_07215
Hypothetical protein.
       0.594
MCE_07880
Glutathione-regulated potassium-efflux system protein; COG0475 Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.529
MCE_04625
COG0642 Signal transduction histidine kinase.
  
  
 0.516
MCE_05825
COG0642 Signal transduction histidine kinase.
  
  
 0.516
MCE_03150
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.486
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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