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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCE_07695Hypothetical protein; COG0500 SAM-dependent methyltransferases. (554 aa)    
Predicted Functional Partners:
MCE_03150
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.653
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
   
 
 0.583
MCE_07690
COG3637 Opacity protein and related surface antigens.
       0.550
MCE_04920
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
 
 0.537
MCE_01310
Cell surface antigen Sca2.
  
     0.532
MCE_06260
Hypothetical protein.
   
 
 0.524
MCE_06755
2-polyprenylphenol 6-hydroxylase; COG0661 Predicted unusual protein kinase.
  
 
 0.512
MCE_01895
COG2941 Ubiquinone biosynthesis protein COQ7; Belongs to the COQ7 family.
   
 
 0.500
MCE_05865
Conjugal transfer protein TraA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
 
   0.477
MCE_05885
Conjugative transfer protein TraG.
  
     0.472
Your Current Organism:
Rickettsia amblyommatis
NCBI taxonomy Id: 1105111
Other names: Candidatus Rickettsia amblyommii str. GAT-30V, R. amblyommatis str. GAT-30V, Rickettsia amblyommatis str. GAT-30V
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