STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG50_00545Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)    
Predicted Functional Partners:
CG50_03890
Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.950
CG50_02525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.934
CG50_03895
Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
   0.934
CG50_15515
Electron transporter SenC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.914
CG50_11875
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
    0.872
CG50_07530
N-acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.661
CG50_00550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.631
CG50_02025
Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.616
CG50_11495
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.616
CG50_12690
Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.616
Your Current Organism:
Paenirhodobacter enshiensis
NCBI taxonomy Id: 1105367
Other names: CCTCC AB 2011145, KCTC 15169, P. enshiensis, Paenirhodobacter enshiensis Wang et al. 2014, Rhodobacter sp. DW2-9, strain DW2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.