STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG50_01405ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)    
Predicted Functional Partners:
CG50_01410
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.921
CG50_01415
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.910
CG50_01390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
CG50_01420
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
CG50_01395
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
CG50_01400
D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
CG50_04715
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.556
CG50_01425
D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.545
CG50_05940
Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.544
CG50_01150
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.542
Your Current Organism:
Paenirhodobacter enshiensis
NCBI taxonomy Id: 1105367
Other names: CCTCC AB 2011145, KCTC 15169, P. enshiensis, Paenirhodobacter enshiensis Wang et al. 2014, Rhodobacter sp. DW2-9, strain DW2-9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.