STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG50_07100Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (358 aa)    
Predicted Functional Partners:
CG50_07090
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.971
CG50_07095
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.971
CG50_01375
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.919
CG50_03040
Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.895
CG50_07105
Lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
CG50_12175
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.868
ugpE
Glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.844
CG50_07110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.844
CG50_02120
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.802
CG50_01370
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.801
Your Current Organism:
Paenirhodobacter enshiensis
NCBI taxonomy Id: 1105367
Other names: CCTCC AB 2011145, KCTC 15169, P. enshiensis, Paenirhodobacter enshiensis Wang et al. 2014, Rhodobacter sp. DW2-9, strain DW2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.