STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG50_08060Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
CG50_08070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
CG50_08075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
CG50_08065
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.937
CG50_01460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
CG50_13470
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.447
Your Current Organism:
Paenirhodobacter enshiensis
NCBI taxonomy Id: 1105367
Other names: CCTCC AB 2011145, KCTC 15169, P. enshiensis, Paenirhodobacter enshiensis Wang et al. 2014, Rhodobacter sp. DW2-9, strain DW2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.