STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG50_09170Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
CG50_09165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.837
CG50_14320
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
CG50_12345
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.696
CG50_09160
Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.683
CG50_06845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
CG50_14040
ATP phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
CG50_03060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
CG50_09075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
CG50_13585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
CG50_12930
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family.
  
     0.492
Your Current Organism:
Paenirhodobacter enshiensis
NCBI taxonomy Id: 1105367
Other names: CCTCC AB 2011145, KCTC 15169, P. enshiensis, Paenirhodobacter enshiensis Wang et al. 2014, Rhodobacter sp. DW2-9, strain DW2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.