STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB34055.1Possible bicarbonate transporter, ICT family. (438 aa)    
Predicted Functional Partners:
trmB
Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.801
ABB34054.1
Conserved hypothetical protein.
       0.784
ABB35122.1
Conserved hypothetical protein.
 
     0.728
ABB34057.1
Conserved hypothetical protein.
       0.715
ABB35691.1
Possible beta-lactamase family protein.
 
     0.648
ABB34058.1
Conserved hypothetical protein.
 
     0.622
ABB34350.1
Conserved hypothetical protein.
  
     0.621
ABB33905.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.620
ABB35340.1
Possible porin; Belongs to the OprB family.
  
     0.610
ABB35179.1
Conserved hypothetical protein.
 
     0.601
Your Current Organism:
Synechococcus sp. CC9605
NCBI taxonomy Id: 110662
Other names: S. sp. CC9605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.