STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB34088.1Elongator protein 3/MiaB/NifB. (887 aa)    
Predicted Functional Partners:
dapL
Putative aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
 
     0.670
ABB34089.1
Ribonuclease, Rne/Rng family.
 
     0.641
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.582
ABB34085.1
Conserved hypothetical protein.
  
    0.558
ABB34086.1
Conserved hypothetical protein; Belongs to the ClpS family.
       0.488
ABB35586.1
Conserved hypothetical protein.
   
    0.407
ABB36258.1
Flavoprotein.
 
    0.404
Your Current Organism:
Synechococcus sp. CC9605
NCBI taxonomy Id: 110662
Other names: S. sp. CC9605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.