STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB34659.1Conserved hypothetical protein. (146 aa)    
Predicted Functional Partners:
cpcS-3
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
       0.773
trmD
tRNA (guanine-N1)-methyltransferase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP); Belongs to the RNA methyltransferase TrmD family.
       0.773
ABB34660.1
Putative circadian phase modifier CpmA.
       0.773
ABB35231.1
Conserved hypothetical protein.
  
     0.767
ABB35335.1
HTH of cAMP family transcriptional regulator.
  
     0.757
ABB35045.1
Conserved hypothetical protein.
  
     0.751
ABB34305.1
Conserved hypothetical protein.
  
     0.742
ABB34361.1
Conserved hypothetical protein.
  
     0.725
ABB34740.1
Conserved hypothetical protein.
  
     0.717
ABB34355.1
Conserved hypothetical protein.
  
     0.708
Your Current Organism:
Synechococcus sp. CC9605
NCBI taxonomy Id: 110662
Other names: S. sp. CC9605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.