STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB34869.1Conserved hypothetical protein. (93 aa)    
Predicted Functional Partners:
ABB34866.1
Elongator protein 3/MiaB/NifB.
 
     0.914
ABB34867.1
Conserved hypothetical protein.
 
     0.914
ABB34868.1
Conserved hypothetical protein.
 
     0.914
ABB34865.1
Probable nitrilase.
 
    0.906
ABB34864.1
Conserved hypothetical protein.
 
     0.903
ABB34863.1
Flavoprotein involved in K+ transport.
 
     0.865
ABB34539.1
Hypothetical protein.
    
 
 0.711
ABB34870.1
Conserved hypothetical protein.
       0.686
ABB34871.1
Conserved hypothetical protein.
       0.686
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
   0.646
Your Current Organism:
Synechococcus sp. CC9605
NCBI taxonomy Id: 110662
Other names: S. sp. CC9605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.